Courses and Lecture Notes

EMBO course on Biomolecular Simulations

I gave two courses with practicals at the EMBO Practical Course on Biomolecular Simulations in July 2000. Here are lecture notes and practical notes in PDF format:

• Lecture Notes on normal mode applications
• Practical Notes on normal mode calculations
• Lecture Notes on programming
• Practical Notes on programming

Python for scientists

In 1997, I gave a six-part course on programming in Python at the Institut de Biologie Structurale in Grenoble. Here is an updated version of the course notes:

• Part 1: Python as a calculator
  Solution to the exercises
• Part 2: Dealing with text files
  Solution to the exercises
• Part 3: Advanced calculations
  Solution to the exercises
• Part 4: Higher mathematics
  Solution to the exercises
• Part 5: Make your own data types
  Solution to the exercises
• Part 6: Graphical user interfaces

Note that the examples in this course requires that you have installed Numerical Python and Scientific Python in addition to the basic Python distribution.

Numerical Python Tutorial

A PDF version of the slides from my tutorial on Numerical Python during the European Python Meeting 2001 in Bordeaux.